Custom Script for Vicia faba VF8137

change_gff_geneid.pl-A script used to change annotation gene ID in structure annotations' gff file. gvcf_ale_freq.py-A script used to calculate the occurrence of genotypes in vcf . makeagpfromscaffold.change.pl-A script used to split scaffold sequence into contigs. merge_loc.py-A script used to merge vcf according to position file. merge_vcf.py-A script used to merge vcf whose corresponding genomes are evenly cut by length. new_vcfgeno.py-This script is used to convert the vcf to a genotype file. split_big_Chr_for_GWAs.py-This script is used to split long chromosomes in vcf file.