REPET_caulifinder v0

Recherche Data Gouv France 2026 Dataset Open access

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Authors: Florian Maumus
DOI: 10.57745/ixkpnv
Cited by: 0

Abstract

REPET_caulifinder is a singularity image that contains the first four steps of TEdenovo from the recipe of REPET_snakemake v4 developed by URGI (https://urgi.versailles.inrae.fr/Tools/REPET, https://forge.inrae.fr/urgi/urgi-anagen/REPET-snakemake). This image is only intended to serve as an execution environment in Caulifinder v2 pipeline (https://forge.inrae.fr/urgi/urgi-anagen/event_caulifinder).

Fields of Study & Subjects

Chromosomal and Genetic Variations Genomics and Phylogenetic Studies Scientific Computing and Data Management

Publication details

Journal / source
Recherche Data Gouv France
Publication date
1 January 2026
Document type
Dataset