Genome assembly and annotation of Dendrobium tangerinum

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Authors: Yixuan Liu
Cited by: 0

Abstract

This dataset consists of the original sequencing and analysis data related to the chromosome-level genome assembly and annotation of Dendrobium tangerinum. This species is an endemic epiphytic orchid from New Guinea, belonging to Dendrobium sect. Spatulata, and has extremely high value for horticultural breeding and evolutionary research. The dataset includes the raw data from PacBio HiFi long-read sequencing, Hi-C chromatin interaction sequencing, and transcriptome annotation sequencing. It also provides 19 chromosome-level genome sequence files and annotation files after assembly and mounting. The genome assembly size is 724.16 Mb, and the BUSCO completeness is 97.2%. This provides high-quality genomic resources for comparative genomics, evolutionary biology, secondary metabolism regulation, and molecular breeding research of the Dendrobium genus and orchids in the Orchidaceae family, and fills the gap in the research on the genome of the sect. Spatulata.

Fields of Study & Subjects

Chromosomal and Genetic Variations Genomics and Phylogenetic Studies Genetic Mapping and Diversity in Plants and Animals

Publication details

Journal / source
ScienceDB
Publication date
9 March 2026
Language
EN
Document type
Dataset