Receptor-Specific Allosteric Architectures Underlie GPCR Coupling Specificity Despite Conserved Activation Mechanisms

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Authors: Marcel Bermúdez, Marvin Taterra
Cited by: 0

Abstract

# Receptor G-protein subunit datasetThis repository contains the molecular dynamics (MD) simulation data used in the manuscript:"Receptor-Specific Allosteric Architectures Underlie GPCR Coupling Specificity Despite Conserved Activation Mechanisms"## ContentsThe dataset includes raw topology files (.pdb) and trajectory files (.dcd) for each system analyzed in the study, as well as the necessary checkpoint files to continue the MD simulations or restart from the point after minimization and equilibration.Additionally included are all MDPath processed outputs and renumbering to allow for easy replication of the findings showcased in the analysis.Each simulation subdirectory is organized by:- G-protein class- Protein/PDB## Directory StructureSupporting_Material/├── Gs/├── Gq/├── Gi/└── README## Example File NamingFor the MOR Gi-subunit bound system:- Supporting_Material/Gi/OPRM_8F7Q_PREPARED## UsageThese data files can be used to:- Reproduce the analyses in the manuscript- Perform additional studies based on this data

Fields of Study & Subjects

Receptor Mechanisms and Signaling Protein Structure and Dynamics Protein Kinase Regulation and GTPase Signaling

Publication details

Journal / source
ScienceDB
Publication date
14 January 2026
Language
EN
Document type
Dataset