mm10 500 bp UTRome (2019.05)

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Authors: Mervin M. Fansler
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Abstract

Input files for the scUTRquant pipeline. These file provide an annotation and kallisto index of 3' UTR ends in the mouse mm10 genome (utrome_mm10_v1).Protocol for data generation published in:Fansler, M.M., Mitschka, S. & Mayr, C. Quantifying 3′UTR length from scRNA-seq data reveals changes independent of gene expression. Nat Commun 15, 4050 (2024). https://doi.org/10.1038/s41467-024-48254-9

Fields of Study & Subjects

RNA Research and Splicing Single-cell and spatial transcriptomics Genomics and Phylogenetic Studies

Publication details

Journal / source
Figshare
Publication date
1 January 2026