Analysis code for "An integrative chemical and genomic similarity approach linking fungal secondary

Based on antiSMASH results, we ran in-house bash and python scripts to collect antiSMASH results (run_prosmash.sh, prosmash.py).To identifying the same antiSMASH predicted BGCs across the 16 genomes, we compared the BGC regions by gene content using antiSMASH7_BGC_clustering.R.For the manual BGC validations, we compiled a markdown detailing all results and decisions (Supplement_BGCs.Rmd)We clustered compounds using rdkit as documented in compound_clustering_A_fischeri.ipnb