Supplementary Data for "Epigenetic Alterations Beyond CpG Islands in Periodontitis: In Silico Study of DNA Methylation Data"

This repository contains all supplementary files associated with the published article:"Epigenetic Alterations Beyond CpG Islands in Periodontitis: In Silico Study of DNA Methylation Data"The supplementary files include:- Differential methylation results (Supplementary_File_1)- Annotated significant CpG sites (Supplementary_File_2)- Illumina 450k annotation reference (Supplementary_File_3)- Integrated beta matrix and sample info (Supplementary_File_4, 5)- Methylation classification tables and beta averages (Supplementary_File_6)- GO enrichment outputs and top GO terms (Supplementary_File_7)- Reproducibility scripts and README files used to generate Tables 1–3 and Figures 1–3.All raw DNA methylation data analyzed in this study were obtained from publicly available Gene Expression Omnibus (GEO) datasets (GSE53849, GSE59932, and GSE59939).