Supplementary Data for Hao et al. (2025) "Imagin: an integrase-like gene conserved across malacostracan crustaceans derived from a Ginger1 DNA transposon"
Abstract
Supplementary_Data_S1_AlphaFold_Models.zip: Supplementary Data S1- AlphaFold2 protein structure models of Imagin proteins.Supplementary_Data_S2_Miniprot_Raw.zip: Supplementary Data S2 - Raw Miniprot output files containing Imagin ortholog genomic alignments.Supplementary_Data_S3_CDS_Alignments_dNdS.zip: Supplementary Data S3: CDS alignments and HyPhy output files for dN/dS analysis.Supplementary_Data_S4_Imagin_phylogeny.zip: Supplementary Data S4 - Multiple sequence alignments and phylogenetic tree files for Imagin orthologs.Supplementary_Data_S5_Augustus_Raw.zip: Supplementary Data S5 - Raw Augustus output files containing Imagin predictions of isopods.Supplementary_Data_S6_DDE_phylogeny.zip: Supplementary Data S6 - Multiple sequence alignments and phylogenetic tree files for DDE integrases and Ginger1 elements.Supplementary_Data_S7_Bioinformatic_methods.md, Supplementary_Data_S7_Bioinformatic_methods.pdf: Supplementary Data S7 - Bioinformatic scripts used in this study.
Fields of Study & Subjects
Chromosomal and Genetic Variations
Crustacean biology and ecology
Genomics and Phylogenetic Studies
Publication details
- Journal / source
- Figshare
- Publication date
- 1 January 2026