Data From "Comparative Genomic Insights into the Evolution of Aquatic and Terrestrial Adaptations in Plants"

VCF files generated for Nymphoides peltata, Posidonia oceanica, Ranunculus bungei and Pontederia crassipes, and "ancestral_binary" VCF files generated for Arabidopsis thaliana, Brachypodium distachyon and Medicago truncatula. "ancestral_binary" VCF files indicate if every allele of every SNP are identical (+0 for every identical alleles) or not (+1 for every different alleles) to the ancestral allele. Every missing allele give a +5 score. This format is made to work with Beaulieu et al. R scripts (10.1038/s41588-024-02071-4) for Tajima's D, Way & Fu's H and Zheng's E computations. Regular VCF formats can be used to compute the NS/S ratio with snpEff, as indicated in our orignal paper.