Genomic datasets for Anguilla japonica: Male and Female assemblies, annotations, CDS, and protein sequences

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Authors: shenglei han
Cited by: 0

Abstract

This dataset contains the chromosome-level genome assemblies and functional annotation files (GFF3, CDS, and Protein sequences) for male and female Japanese eels (Anguilla japonica).Dataset Contents:Genomic Sequences: Chromosome-level assemblies (.fasta)Annotations: Gene structure predictions (.gff3)Sequences: Coding sequences (.cds) and protein sequences (.pep)Assembly & Annotation Quality: Both genomes demonstrate exceptional completeness and continuity, evaluated against the actinopterygii_odb10 lineage:Male Assembly (1.07 Gb, Scaffold N50: 58.89 Mb):Assembly Completeness (compleasm): 99.09%Annotation Completeness (Protein BUSCO): 99.00%Female Assembly (1.08 Gb, Scaffold N50: 60.98 Mb):Assembly Completeness (compleasm): 98.95%Annotation Completeness (Protein BUSCO): 97.70%Related Data: Raw sequencing reads (HiFi, ONT, Hi-C, WGS, RNA-Seq) are available in the NCBI BioProject database under accession PRJNA1414889.

Fields of Study & Subjects

Genomics and Phylogenetic Studies Chromosomal and Genetic Variations Reproductive biology and impacts on aquatic species

Publication details

Journal / source
Figshare
Publication date
1 January 2026
Document type
Dataset