Additional file 2 of Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte shifts in epileptogenesis beyond the hippocampus

Supplementary Material 2: Supplementary Fig. 2. Whole clustering. A Four panels of UMAP representation of all spots passing quality control colored according to clusters, condition (treated or control), time points or sample of origin (from top to bottom and from left to right). The mean silhouette score is indicated in the top of each plot. B Spatial plots of clusters on tissue slices of samples at the D5 time point (treated samples on top, control samples on bottom). C and D Example of hippocampal and cortical marker (Cabp7 and Tbr1, respectively) expression levels after log2 transformation. Violin plots per cluster (top), spatial plots on the tissue slice of the control samples at the D5 time point (bottom).