Demo reference genomes for metagenomic PT-seq data analysis for a demo dataset

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Authors: Yifeng Yuan
Cited by: 0

Abstract

Demo reference genomes for metagenomic PT-seq data analysis for a demo dataset of the sample used in the repository https://github.com/dedonlab/metagenomic_PT-seq_data_analysisThe reference genomes are extracted from UHGG2 (https://www.ebi.ac.uk/metagenomics/genome-catalogues/human-gut-v2-0-2) based on the Kraken2-Bracken result from PT-seq methods in the manuscript entitled "PT-seq: A method for metagenomic analysis of phosphorothioate epigenetics in complex microbial communities"Authos: Yifeng Yuan, Michael S. DeMott, Shane R. Byrne, and Peter C. Dedon

Fields of Study & Subjects

Genomics and Phylogenetic Studies Epigenetics and DNA Methylation Gut microbiota and health

Publication details

Journal / source
Figshare
Publication date
4 March 2026
Language
EN
Document type
Dataset