Demo reference genomes for metagenomic PT-seq data analysis for a demo dataset
Abstract
Demo reference genomes for metagenomic PT-seq data analysis for a demo dataset of the sample used in the repository https://github.com/dedonlab/metagenomic_PT-seq_data_analysisThe reference genomes are extracted from UHGG2 (https://www.ebi.ac.uk/metagenomics/genome-catalogues/human-gut-v2-0-2) based on the Kraken2-Bracken result from PT-seq methods in the manuscript entitled "PT-seq: A method for metagenomic analysis of phosphorothioate epigenetics in complex microbial communities"Authos: Yifeng Yuan, Michael S. DeMott, Shane R. Byrne, and Peter C. Dedon
Fields of Study & Subjects
Genomics and Phylogenetic Studies
Epigenetics and DNA Methylation
Gut microbiota and health
Publication details
- Journal / source
- Figshare
- Publication date
- 4 March 2026
- Language
- EN
- Document type
- Dataset