Map Liberator: An open-source tool for recovering spatial epidemiological data from static situation reports

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Authors: David Simons
Cited by: 0
References: 7

Abstract

Abstract Background Much of the world’s historical and current epidemiological data remains locked in static formats, such as PDF situation reports or image-based surveillance bulletins. Recovering this data for spatial analysis typically requires proprietary software (e.g., ArcGIS) or laborious manual entry, which is prone to transcription errors. Methods I developed Map Liberator, an open-source application built in R and Shiny. It provides a split-screen digitisation interface that allows users to overlay static reference maps alongside interactive administrative boundaries. The tool uses a stateful rendering engine to manage complex geometries (up to Admin Level 3) and facilitates the extraction of binary, numeric, or qualitative data directly into a structured, machine-readable format. Results I demonstrate the tool’s utility by digitizing Lassa Fever surveillance data from Nigeria (2018-2025). The tool successfully aligned static situation reports with official Local Government Area (LGA) boundaries, allowing for the rapid recovery of binary presence/absence data that was previously inaccessible for computational modelling. Conclusions Map Liberator provides a low-barrier, cost-effective solution for field epidemiologists and researchers to liberate spatial data from static reports, supporting the principles of FAIR (Findable, Accessible, Interoperable, Reusable) data in global health.

Fields of Study & Subjects

Data-Driven Disease Surveillance Geographic Information Systems Studies Research Data Management Practices

Publication details

Journal / source
medRxiv
Publication date
27 January 2026
Document type
Preprint