Improved bipartite plots of ecological networks using the k-core decomposition with the BipartGraph application

Read full text
Authors: Javier García-Algarra
Cited by: 0
References: 43

Abstract

Visualizing bipartite networks with the well-known bipartite plot often produces an obfuscated image. This article introduces an approach that uses a two-pronged strategy to improve the readability of conventional bipartite plots. First, it reorders the network layout based on the k-core decomposition, positioning the central species more prominently. Second, it reduces visual clutter by grouping and compactly representing peripheral nodes. The new plotting feature is integrated into the open-source R package kcorebip and is also offered in the interactive web application BipartGraph. We explain the advantages of this innovation through several representative use cases showcasing its ability to generate clearer, more interpretable visualizations.

Fields of Study & Subjects

Complex Network Analysis Techniques Data Visualization and Analytics Bioinformatics and Genomic Networks

Publication details

Journal / source
PeerJ Computer Science
Volume
12
Pages
e3526–e3526
Publication date
13 January 2026
Language
EN