Sclerotia Microbiome

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Authors: Zhong-Han Shie, Hao‐Xun Chang
Cited by: 0

Abstract

The data contains: (1) PacBio full-length 16S rRNA sequencing results for the sclerotia microbiome of Sclerotinia sclerotiorum. The sclerotia are buried in two different treatments (soil with flooding and autoclaved soil with flooding) in order to contrast the microbial effects (bacterial microbiome) in sclerotia mortality. The sclerotia were collected for sequencing at 7 timepoints (1-, 3-, 5-, 7-, 14-, 21-, and 28-day), and each factorial combination (treatment x timepoints) have 5 biological replicates. Due to the DNA qualities of 5 samples were not passed for entering PacBio sequencing, there are a total of 65 samples compressed in this file (2 treatments x 7 timepoints x 5 replicates = 70, subtracting 5 failed samples >> 65 samples). (2) The genome sequence and annotation of Trinickia sclerotiorum sp. nov. type strain MC (TsMC), a newly characterized bacterium from sclerotia.

Fields of Study & Subjects

Plant pathogens and resistance mechanisms Plant-Microbe Interactions and Immunity Microbial Community Ecology and Physiology

Publication details

Journal / source
Harvard Dataverse
Publication date
5 February 2026
Language
EN
Document type
Dataset