PruneRAG: Confidence-Guided Query Decomposition Trees for Efficient Retrieval-Augmented Generation

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Authors: Shuguang Jiao, Xinyu Xiao, Yunfan Wei, Shuhan Qi, Chengkai Huang, Quan Z. Michael Sheng, Lina Yao
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Abstract

Retrieval-augmented generation (RAG) has become a powerful framework for enhancing large language models in knowledge-intensive and reasoning tasks. However, as reasoning chains deepen or search trees expand, RAG systems often face two persistent failures: evidence forgetting, where retrieved knowledge is not effectively used, and inefficiency, caused by uncontrolled query expansions and redundant retrieval. These issues reveal a critical gap between retrieval and evidence utilization in current RAG architectures. We propose PruneRAG, a confidence-guided query decomposition framework that builds a structured query decomposition tree to perform stable and efficient reasoning. PruneRAG introduces three key mechanisms: adaptive node expansion that regulates tree width and depth, confidence-guided decisions that accept reliable answers and prune uncertain branches, and fine-grained retrieval that extracts entity-level anchors to improve retrieval precision. Together, these components preserve salient evidence throughout multi-hop reasoning while significantly reducing retrieval overhead. To better analyze evidence misuse, we define the Evidence Forgetting Rate as a metric to quantify cases where golden evidence is retrieved but not correctly used. Extensive experiments across various multi-hop QA benchmarks show that PruneRAG achieves superior accuracy and efficiency over state-of-the-art baselines.

Fields of Study & Subjects

Topic Modeling Information Retrieval and Search Behavior Multimodal Machine Learning Applications

Publication details

Journal / source
arXiv (Cornell University)
Publication date
16 January 2026
Document type
Preprint